Ub-FP
a fluorescence polarization assay reagent based on a 5-carboxytetramethylrhodamine (TAMRA) modified Lys-Gly sequence that is linked to ubiquitin via a native isopeptide bond with the lysine side-chain
Additional information
Weight | 0.005 kg |
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aliquot size | |
Applications | DUB activity profiling, Compound library screening, Target inhibitor profiling |
target | |
source | |
shipping | |
purity | |
molecular weight | |
storage | |
sample preparation | For detailed sample preparation see product sheet. |
regulatory statement |
€250.00
- Description
- Additional information
- references
- ubiquitin FP
Description
UbiQ-012 (Ub-FP) is a fluorescence polarization assay reagent which is based on a 5-carboxytetramethylrhodamine (TAMRA) modified Lys-Gly sequence that is linked to ubiquitin via a native isopeptide bond with the lysine side-chain. Typical substrate concentrations range from 10−100 nM. DUB concentrations can range from 0.01-10 nM but depend on specific assay conditions and method of detection.
Additional information
Weight | 0.005 kg |
---|---|
aliquot size | |
Applications | DUB activity profiling, Compound library screening, Target inhibitor profiling |
target | |
source | |
shipping | |
purity | |
molecular weight | |
storage | |
sample preparation | For detailed sample preparation see product sheet. |
regulatory statement |
Tirat, A., et al. Synthesis and characterization of fluorescent ubiquitin derivatives as highly sensitive substrates for the deubiquitinating enzymes UCH-L3 and USP-2. Anal. Biochem. 343, 244-255 (2005).
http://www.ncbi.nlm.nih.gov/pubmed/15963938
Huang, X. & Aulabaugh A. Application of fluorescence polarization in HTS assays. Methods in Molecular Biology 565, 127-143 (2009). http://www.ncbi.nlm.nih.gov/pubmed/19551360
Levine, L.M., et al. Measurement of specific protease activity utilizing fluorescence polarization. Anal. Biochem. 247, 83-88 (1997). http://www.ncbi.nlm.nih.gov/pubmed/9126375
Geurink, P.P., et al. A general chemical ligation approach towards isopeptide-linked ubiquitin and ubiquitin-like assay reagents. ChemBiochem 13, 293-297 (2012). http://www.ncbi.nlm.nih.gov/pubmed/22213387
Ubiquitin FP (Ub-FP, UbiQ-012) is a fluorescence polarization assay reagent for deubiquitinating enzymes (DUBs). It is based on a Lys-Gly dipeptide that is modified on the N-terminus with a 5-carboxytetramethylrhodamine (TAMRA) dye and monoubiquitinated on the Lys residue via a native isopeptide. Our FP reagent design also allows for the addition of more and specific substrate context by introducing 10 to 15 amino acids long polypeptides (e.g. our class II FP reagents). Compared to quenched assay reagents, Ub-FP assay reagents have two unique characteristics. First, they contain a native isopeptide bond, and second, they allow for adding more substrate context than ubiquitin alone.
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