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Introducing UbiQ-314: an activity-based probe for USP7

We announce the launch of an activity-based probe that is designed to selectively target USP7: UbiQ-314. Reported by Gjonaj et al., probe UbiQ-314 is based on Ub with the following mutations: T7D, L8Y, I13R, E34L, Q40N, L69A, and L71A. In addition:

 

  • Lys58 contains a biotin tag which, besides detection and binding, also serves to increase USP7 selectivity by prohibiting binding of most USPs
  • the N-terminus is functionalised with a 5-carboxyrhodamine110 dye (cRh110, exc/emi 480/520 nm) allowing for sensitive (and fast in-gel fluorescence) detection
  • a cysteine residue is introduced between the dye and N-terminus for further modification with thiol-reactive tags
  • a C-terminal propargyl amide (PA) warhead forms a covalent linkage with the active site Cys of USP7 – this can be cleaved by treatment with 5% aq. TFA, allowing for proteomic analyses.

 

 

Figure 1. K58K(biotin) cRh110-Cys-Ubv(USP7)-PA (UbiQ-314)

 

Reference: Lorina Gjonaj, Aysegul Sapmaz, Román González-Prieto, Alfred C. O. Vertegaal, Dennis Flierman, Huib Ovaa. USP7: combining tools towards selectivity. Chem Comm 2019, 55, 5075,